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2006

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Nitrogen Cycling and Mass Balance for a Forested Catchment in the Italian Alps – Assessment of Nitrogen Status, R. Balestrini, N. Di Martino, and Helga Van Miegroet; Biogeochemistry

Empirical Model for Estimating Attenuation of Ultraviolet Radiation in Streams, Patrick Belmont, B. R. Hargreaves, and D. P. Morris; Empirical Model for Estimating Attenuation of Ultraviolet Radiation in Streams

Using the 10-Be Grain Size Dependency in Alluvial Sediments to Investigate Hillslope and Channel Processes, Patrick Belmont, F. J. Pazzaglia, and J. Gosse; Using the 10-Be Grain Size Dependency in Alluvial Sediments to Investigate Hillslope and Channel Processes

Evaluating the Combined Effects of Enviornmental Variation, Biotic Interactions, and Disease on the Abundance and Distribution of Exotic Brown Trout (Salmo trutta), Phaedra Budy; Evaluating the Combined Effects of Environmental Variation, Biotic Interactions, and Disease on the Abundance and Distribution of Exotic Brown Trout (Salmo trutta)

Understanding the Food Web Interactions and Role of a New Invader in a Large, Western Reservoir, Phaedra Budy; Understanding the Food Web Interactions and Role of a New Invader in a Large, Western Reservoir

Understanding the Synergistic Effects of Disease, Species Interactions, and Environmental Varation on the Survival and Persistence of an Imperiled Trout, Phaedra Budy; Understanding the Synergistic Effects of Disease, Species Interactions, and Environmental Variation on the Survival and Persistence of an Imperiled Trout

Bull trout population assessment in northeastern Oregon: a template for recovery planning Annual Progress Report for 2005, Phaedra Budy, Robert Al-Chokhachy, Kristen Homel, and Gary P. Thiede; Utah Cooperative Fish and Wildlife Research Unit Department of Watershed Sciences Utah State University

Evaluating the Potential of Tributary Restoration to Increase the Overall Survival of Salmon: Is It Enough?, Phaedra Budy and H. Schaller; Evaluating the Potential of Tributary Restoration to Increase the Overall Survival of Salmon: Is It Enough?

Quantification of Survival, Site-Fidelity, Abundance, and Trend for a Critical Population of Endemic Cutthroat Trout, Phaedra Budy, G. P. Thiede, and P. McHugh; Quantification of Survival, Site-Fidelity, Abundance, and Trend for a Critical Population of Endemic Cutthroat Trout

Predictig the Growth Potential of a Shallow, Warm-Water Sport Fishery: A Spatially Explicit Bioenergetics Approach, K. S. Dahle and Phaedra Budy; Predicting the Growth Potential of a Shallow, Warm-Water Sport Fishery: A Spatially Explicit Bioenergetics Approach

Predicting the Growth Potential of a Shallow, Warm-Water Sport Fishery: A Spatially Explicit Bioenergetics Approach, K. S. Dahle and Phaedra Budy; Predicting the Growth Potential of a Shallow, Warm-Water Sport Fishery: A Spatially Explicit Bioenergetics Approach

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Use of predictive models to attribute potential effects of mixture toxicity and habitat alteration on the biological condition of fish assemblages, D. de Zwart, S. D. Dyer, L. Posthuma, and C. P. Hawkins; Ecological Applications

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Toward a Unified Science of the Earth's Surface: Opportunities for Synthesis Among Hydrology, Geomorphology, Geochemistry, and Ecology, C. E. Foufoula-Georgiou, W. E. Dietrich, M. Hondzo, D. Mohrig, G. Parker, M. E. Power, I. Rodriguez-Iturbe, V. Voller, and P. Wilcock; Water Resources Research

Evaluating the Effectiveness of Passive Stream Restoration for Improving Native Fish Health and Reducing the Impacts of Whirling Disease, E. S. Hansen, Phaedra Budy, and G. P. Thiede; Evaluating the Effectiveness of Passive Stream Restoration for Improving Native Fish Health and Reducing the Impacts of Whirling Disease

Evaluating the Effectiveness of Passive Stream Restoration for Improving Native Fish Health and Reducing the Impacts of Whirling Disease, E. S. Hansen, Phaedra Budy, and G. P. Thiede; Evaluating the Effectiveness of Passive Stream Restoration for Improving Native Fish Health and Reducing the Impacts of Whirling Disease

Evaluating the Effects of Passive Stream Restoration on Riparian and Benthic Habitat, and Ultimately Fish Health, E. S. Hansen, Phaedra Budy, and G. P. Thiede; Evaluating the Effects of Passive Stream Restoration on Riparian and Benthic Habitat, and Ultimately Fish Health

Adjustment of the Bed Surface Size Distribution of Gravel-Bed Rivers in Response to Cycled Hydrograph, G. M. Hassan and Peter Wilcock; Gravel-Bed Rivers VI

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Maintaining and restoring the ecological integrity of freshwater ecosystems: improving management by refining biological assessments, C. P. Hawkins; Ecological Applications

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Quantifying biological integrity by taxonomic completeness: evaluation of a potential indicator for use in regional-and global-scale assessments, C. P. Hawkins; Ecological Applications

Stable isotope signatures of benthic invertebrates in arctic lakes demostrate limited coupling to pelagic production, A. E. Hershey, S. Beaty, K. Fortino, S. Kelly, M. Keyse, Chris Luecke, W. J. O'Brien, and S. C. Whalen; Limnology and Oceanography

Effect of landscape factors on fish distribution in arctic Alaskan lakes, A. E. Hershey, S. Beaty, K. Fortino, M. Keyse, P. P. Mou, W. J. O'Brien, A. J. Ulseth, G. A. Gettel, P. W. Lienesch, and Chris Luecke; Freshwater Biology

Evaluating the Genetic Population Structure and Movement Patterns of Bull Trout (Salvelinus confluentus) in Northeast Oregon, K. Homel and Phaedra Budy; Evaluating the Genetic Population Structure and Movement Patterns of Bull Trout (Salvelinus confluentus) in Northeast Oregon

The Influence of Abiotic and Biotic Factors on the Migration Timing of Subadult Bull Trout (Salvelinus confluentus) in Northeast Oregon, K. Homel and Phaedra Budy; The Influence of Abiotic and Biotic Factors on the Migration Timing of Subadult Bull Trout (Salvelinus confluentus) in Northeast Oregon

The Movement Continuum: Evaluating the Migration Patterns of Juvenile Bull Trout ( Salvelinus confluentus) in Northeast Oregon, K. Homel and Phaedra Budy; The Movement Continuum: Evaluating the Migration Patterns of Juvenile Bull Trout (Salvelinus confluentus) in Northeast Oregon

Ecological differences between two closely related morphologically similar benthic whitefish in an endemic whitefish complex, B. M. Kennedy, B. W. Thompson, and Chris Luecke; Canadian Journal of Fisheries and Aquatic Sciences

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Effect of Light on Seed Germination of Eight Wetland Carex Species, Karin M. Kettenring, Gary M. Gardner, and Susan M. Gelatowitsch; Annals of Botany

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Good Practices for Sharing Ecological Models, Karin M. Kettenring, Barbara T. Martinez, Anthony M. Starfield, and Wayne M. Getz; BioScience

Flow convergence and routing hypothesis for pool-­‐riffle maintenance in alluvial rivers, M. L. MacWilliams Jr., Joseph M. Wheaton, G. B. Pasternack, R. L. Street, and P. K. Kitanidis; Water Resources Research

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Temperature and Nutrient Supply Interact to Control Nitrogen Fixation in Oligotrophic Streams: An Experimental Examination, A. M. Marcarelli and Wayne A. Wurtsbaugh; Limnology and Oceanography

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Salinity Controls Phytoplankton Response to Nutrient Enrichment in the Great Salt Lake, Utah, USA, A. M. Marcarelli, Wayne A. Wurtsbaugh, and O. Griset; Canadian Journal of Fisheries and Aquatic Sciences

Experimental Effects of Nonnative Brown Trout on the Individual- and Population-Level Performance of Native Cutthroat Trout, P. McHugh and Phaedra Budy; Transactions of the American Fisheries Society

Sediment budget for salmonid spawning habitat rehabilitation in a regulated river, J. E. Merz, G. B. Pasternack, and Joseph M. Wheaton; Geomorphology

Improving environmental water use efficiency, Sarah E. Null and J. R. Lund; US EPA Graduate Fellowship Conference. Washington, DC

Re-assembling Hetch Hetchy: Water supply without O’Shaughnessy Dam, Sarah E. Null and J. R. Lund; Journal of the American Water Resources Association

Restoring Hetch Hetchy Valley: The role of modeling in policy, Sarah E. Null and J. R. Lund; EOS Transactions, American Geophysical Union

Error Propagation for Velocity and Shear Stress Prediction: Using 2D Models For Environmental Management, G. B. Pasternack, A. T. Gilbert, Joseph M. Wheaton, and E. M. Buckland; Journal of Hydrology

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The Spatial and Temporal Dynamics of Deep Chlorophyll Layers in High-Mountain Lakes: Effects of Nutrients, Grazing, and Herbivore Recycling as Growth Determinants, C. L. Sawatzky, Wayne A. Wurtsbaugh, and Chris Luecke; Journal of Plankton Research

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Setting expectations for the ecological condition of running waters: the concept of reference condition, J. L. Stoddard, P. Larsen, C. P. Hawkins, R. K. Johnson, and R. H. Norris; Ecological Applications

Selecting discriminant function models for predicting the expected richness of aquatic macroinvertebrates, J. Van Sickle, D. D. Huff, and C. P. Hawkins; Freshwater Biology

Does scientific conjecture accurately describe restoration practice? Insight from an International River Restoration Survey, Joseph M. Wheaton, S. E. Darby, D. A. Sear, and J. A. Milne; Area

Fluids Go to Bed: Transport & Sorting in Coarse-Bedded Streams, Peter Richard Wiclock; Center for Environmental and Applied Fluid Mechanics

Sediment Transport and Stream Renaturalization Success, Peter Richard Wilcock; Center for Riverine Science and Stream Re-naturalization 2006 Conference, University of Montana

Sediment Transport in Stream Channel Planning and Design, Peter Richard Wilcock; Maryland Stream Resotraion Interest Group

Streambank Stabilization, Peter Richard Wilcock; Chesapeake Bay Program, Science and Technical Advisory Group, Workshop on Quantifying the Role of Stream Restoration in Achieving Nutrient and Sediment Reductions

StreamLab: Collaborative Experimental Research at the National Center for Earth-surface Dynamics, Peter Richard Wilcock; Consortium of Universities for Advancement of Advancement of Hydrologic Science (CUASHI) Cyberseminar

Stream Restoration - From Analogy to Prediction, Peter Richard Wilcock; 2006 Utah State University Spring Runoff Conference

Understanding Sediment Transport, Peter Richard Wilcock; North Carolina Stream Restoration Conference

Research, Coordination, and Open-Source Models to improve Stream Restoration Practice,, Peter Richard Wilcock and G. Parker; Proceedings, 8th Federal Interagency Sedimentation Conference, Reno, NV

Severe Eutrophication in Farmington Bay, a Polluted Embayment of the Great Salt Lake, Utah, Wayne A. Wurtsbaugh, Amy Marcarelli, David Naftz, and Shany Bradt; Spring Runoff Conference

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Spatial Analyses of Trophic Linkages between Basins in the Great Salt Lake, Wayne A. Wurtsbaugh, David Naftz, and Shane Bradt; Division of Forestry, Fire & State Lands Salt Lake City, UT

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Eutrophication in Farmington Bay, Great Salt Lake, Utah 2005 Annual Report, Wayne Wurtsbaugh and Amy Marcarelli

2005

A Comparison of Redd Counts and Mark/Resight Methods for Estimating Abundance and Monitoring Bull Trout Population Trends, R. Al-Chokhachy, P. Budy, and H. Schaller; North American Journal of Fisheries Management

In Situ Terrestrial Cosmogenic Nuclides in Alluvial Sediment: Grain Size Matters, Patrick Belmont, F. J. Pazzaglia, and J. Gosse; In Situ Terrestrial Cosmogenic Nuclides in Alluvial Sediment: Grain Size Matters

Responses of fish to the 1980 Eruption of Mount St. Helens, P. A. Bison, C. M. Crisafulli, B. R. Fransen, R. E. Lucas, and C. P. Hawkins; Ecological responses to the 1980 eruptions of Mount St. Helens

Zooplankton Size Selection relative to Grill Raker Spacing in Rainbow Trout (Oncorhynchus mykiss), Phaedra Budy, T. Haddix, and R. Schneidervin; Transactions of the American Fisheries Society

Simulating biological impairment to evaluate the accuracy of ecological indicators, Y. Cao and C. P. Hawkins; Journal of Applied Ecology

A method for measuring the compareability of different sampling methods used in biological surveys: implications for data integration and synthesis, Y. Cao, C. P. Hawkins, and A. D. Story; Freshwater Biology

Amphibian responses to the 1980 eruption of Mount St. Helens, C. M. Crisafulli, L. S. Trippe, C. P. Hawkins, and J. A. MacMahon; Ecological responses to the 1980 eruptions of Mount St. Helens

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Characteristic Dimensions of the Step-Pool Bed Configuration: and Experimental Study, J. C. Curran and Peter Richard Wilcock; Water Resources Research

The Effect of Sand Supply on Transport Rates in a Gravel-Bed Channel, J. C. Curran and Peter Richard Wilcock; J. Hydraulic Engineering

Effects of Biotic and Abiotic Factors on the Distribution of Trout and Salmon Along a Longitudinal Stream Gradient, E. A. de la Hoz Franco and Phaedra Budy; Environmental Biology of Fishes

Observations of Armor Formation in a Sediment-Recirculating Flume, B. T. DeTemple and Peter Richard Wilcock; River, Coastal and Esturaine Morphodynamics

Fault Slip Rates on the Northern Death Valley Fault Zone and Eastern California Shear Zone Kinematics, K. L. Frankel, J. F. Dolan, R. C. Finkel, L. A. Owen, J. R. Knott, Patrick Belmont, and J. Lee; Fault Slip Rates on the Northern Death Valley Fault Zone and Eastern California Shear Zone Kinematics

Entrainment and Non-Uniform Transport of Fine Sediment in Coarse-Bedded Rivers, P. E. Grams, Peter Richard Wilcock, and S. M. Wiele; River, Coastal and Esturaine Morphodynamics

Factors that Limit Growth and Abundance of Rainbow Trout (Oncorhynchus mykiss) Across Ecologically Distinct Areas of Flaming Gorge Reservoir, Utah-Wyoming, T. Haddix and Phaedra Budy; North American Journal of Fisheries Management

Fauna of Yosemite National Park lakes has low resistance but high resilience to fish introductions, R. A. Knapp, C. P. Hawkins, J. Ladau, and J. A. Garton; Ecological Applications

Hetch Hetchy Reclaimed: Water questions are always flowing, J. R. Lund and Sarah E. Null; Sacramento Bee, Sunday Forum section

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Ecological Analysis of Nutrient, Plankton and Benthic Communities in Farmington Bay and the Great Salt Lake, Utah (2004), Amy Marcarelli and Wayne A. Wurtsbaugh; A Report to the Utah Division of Water Quality

A Comparison of Visual Measurement-Based Techniques for Quantifying Cobble Embeddedness and Fine Sediment Levels in Salmonid-Bearing Steams, P. McHugh and Phaedra Budy; North American Journal of Fisheries Management

An Experimental Evaluation of Competitive and Thermal Effects on Brown Trout (Salmo trutta) and Cutthroat Trout ( Oncorhynchus clarki utah) Performance Along an Altitudinal Gradient, P. McHugh and Phaedra Budy; Canadian Journal of Fisheries and Aquatic Sciences

A null model for the expected macroinvertebrate assemblage in streams, J. Van Sickle, C. P. Hawkins, D. P. Larsen, and A. T. Herlihy; Journal of the North American Benthological Society

STREAM and LAASM: Models for Mono Basin Operations, S. K. Tanaka, M. L. Deas, and Sarah E. Null; Los Angeles Department of Water and Power

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Soil Carbon Distribution and Quality in a Montane Rangeland-Forest Mosaic in Northern Utah, Helga Van Miegroet, J. L. Boettinger, Michelle A. Baker, J. Nielsen, D. Evans, and A. Stum; Forest Ecology and Management

Artificial Floods in Grand Canyon: Are They Working?, Peter Richard Wilcock; Geological Society of Natural Resources, Monitorint and Non-Tidal Assessmnet Division, Public Seminar

Research, Method Development, and Training in Stream Restoration: Initiative at the National Center for Earth-Surface Dynamics, Peter Richard Wilcock; Baltimore Ecosystem Study (NSF LTER)

Sediment Transport in Stream Resoration Design, Peter Richard Wilcock; Maryland Dept. of Natural Resources, Monitorigng and Non-Tidal Assessment Division, Public Seminar

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Persistence of Armor Layers in Gravel-Bed Streams, Peter Richard Wilcock and B. T. DeTemple; Geophysica Research Letters

Lakes as Nutrient “Sources” for Watersheds: A Landscape Analysis of the Temporal Flux of Nitrogen through Sub-Alpine Lakes and Streams, Wayne A. Wurtsbaugh, Michelle A. Baker, H. P. Gross, and P. D. Brown; Verhandlungen der Internationalen Vereinigung für Theoretische und Angewandte Limnologie

Landscape Patterns of Streams & Lakes in Montane Watersheds Determine Water Temperatures & Nutrient Transport: Watershed Analyses and N Tracer Experiments, Wayne A. Wurtsbaugh, J. Garrett, G. Burkart, W. Fleenor, K. Nydick, R. Hall, and Michelle A. Baker; American Society of Limnology and Oceanography, Spain

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Continuing Analysis of Phytoplankton Nutrient Limitation in Farmington Bay and the Great Salt Lake, Wayne A. Wurtsbaugh and Amy Marcarelli; Report To The Central Davis Sewer Improvement District

2004

Linking Environmental Heterogeneity to the Distribution and Prevalence of Myxobolus cerebralis: A Comparison Across Sites in a Northern Utah, E. A. de la Hoz Franco and Phaedra Budy; Transactions of the American Fisheries Society

Complex Channel Responses to Changes in Stream Flow and Sediment Supply on the Lower Duchesne River, Utah, D. A. Gaeuman, J. C. Schmidt, and Peter Richard Wilcock; Geomorphology

Brine Shrimp Predation by an Invertebrate Predator in Farmington Bay, Great Salt Lake, Utah, Amy Marcarelli and Wayne A. Wurtsbaugh; Spring Runoff Conference

Patterns of Spawning Habitat Selection and Suitability for Two Populations of Snake River Spring Chinook Salmon, P. McHugh and Phaedra Budy; Transactions of the American Fisheries Society

A Model-Based Assessment of the Potential Response of Snake River Spring/Summer Chinook Salmon to Habitat Improvements, P. McHugh, Phaedra Budy, and H. Schaller; Transactions of the American Fisheries Society

Predicting benefits of spawning-­‐ habitat rehabilitation to salmonid (Oncorhynchus spp.) fry production in a regulated California river, J. E. Merz, J. D. Setka, G. B. Pasternack, and Joseph M. Wheaton; Canadian Journal of Fisheries and Aquatic Sciences

Effects of sampling error on bioassessments of stream ecosystems: application to RIVPACS-type models, J. D. Ostermiller and C. P. Hawkins; Journal of the North American Benthological Society

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Evidence of Coprophagy in Freshwater Zooplankton, A. Pilati, Wayne A. Wurtsbaugh, and N. R. Brindza; Freshwater Biology

Interpreting results of ecological assessments, R. J. Stevenson, R. C. Bailey, M. C. Harass, C. P. Hawkins, J. Alba-Tercedor, C. Couch, S. Dyer, F. A. Fulk, J. M. Harrington, C. T. Hunsaker, and R. K. Johnson

Designing data collection for ecological assessments, R. J. Stevenson, R. C. Bailey, M. C. Harrass, C. P. Hawkins, J. Alba-Tercedor, C. Couch, S. Dyer, F. A. Fulk, J. M. Harrington, C. T. Hunsaker, and R. K. Johnson; Ecological Assessment of Aquatic Resources: Linking Science to Decision Making

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Exploring Interactions Between Pollutant Emissions and Climatic Variability in Growth of Red Spruce in the Great Smoky Mountains National Park, K. L. Webster, I. F. Creed, N. S. Nicholas, and Helga Van Miegroet; Water, Air, and Soil Polution

Modelling Fluvial Sediment Budgets Under Uncertainty, Joseph M. Wheaton, J. Brasington, and R. D. Williams; Eos Trans.

Use of habitat heterogeneity in salmonid spawning habitat rehabilitation design, Joseph M. Wheaton, G. B. Pasternack, and J. E. Mertz; Fifth International Symposium on Ecohydraulics: Aquatic Habitats: Analysis and Restoration

Spawning Habitat Rehabilitation -­‐ I. Conceptual Approach and Methods, Joseph M. Wheaton, G. B. Pasternack, and J. E. Merz; International Journal of River Basin Management

Spawning Habitat Rehabilitation -­‐ II. Using Hypothesis Testing and Development in Design, Mokelumne River, California, U.S.A., Joseph M. Wheaton, G. B. Pasternack, and J. E. Merz; International Journal of River Basin Management

Preliminary Results of an International River Restoration Survey, Joseph M. Wheaton, D. A. Sear, and S. E. Darby; River Restoration Centre Annual Network Conference

Uncertain Notions of `Natural' Targets in River Restoration, Joseph M. Wheaton, D. A. Sear, and S. E. Darby; Joint International Geomorphology Conference

Sediment Transport in Gravel-Bed Rivers, with Implications for Channel Change, Peter Richard Wilcock; University of California, Berkeley

Sediment Transport in the Restoration of Gravel-bed Rivers, Peter Richard Wilcock; Environmental and Water Resources Institute

Sediment Transport in the Restoration of Gravel-bed Rivers, Peter Richard Wilcock; American Society of Civil Engineers, Environment and Water Resources Institute Annual Congress, Salt Lake City