Title

Data from "Admixture, evolution, and variation in reproductive isolation in the Boechera puberula clade"

Description

- .fastq files (Raw data from 79 individuals) - zipped

- *.vcf file (variant call files)

- *.gl (genotype likelihoods file)

- k8admixProps.csv (admixture proportions)

- k8gprob_mngt.txt (mean genotypes estimated by entropy)

- All scripts for analysis can be found at Github repository. https://github.com/schimar/hts_tools

Document Type

Dataset

Document Type

Dataset

File Format

.csv, .fastq, .vcf. .gl

Publication Date

9-15-2017

Publisher

Utah State University

Funder

NSF, Division of Environmental Biology

Utah State University Ecology Center

Award Number

0816560

Scientfic Names

B. serpenticola, B. retrofacta, B. puberula subsp. puberula, B. subpinnatifida, B. lasiocarpa, B. puberula subsp. arida

Language

eng

Code Lists

serpenti = B. serpenticola

retro = B. retrofacta

p.pub = B. puberula subsp. puberula

subpi = B. subpinnatifida

lasio = B. lasiocarpa

p. arida = B. puberula subsp. arida

Comments

Funding:

Lab work and High-throughput sequencing were partly funded by a USU Ecology Center Graduate Research Award for MPS; additional microsatellite work was funded under National Science Foundation award DEB-0816560 to MDW.

License

Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.

Identifier

10.15142/T3Z91H

README.txt (3 kB)
MD5 = fd19119709b7ac5bba6d052ef70b29cf

k8admixProps.csv (6 kB)
MD5 = 83f21259b9091b0e3c3a0f6936dc71b4

fltrd_pubRetStri_dipUG35_filter_fracData80.gl (17638 kB)
MD5 = b5c17d85893d81543a4773ceebe77059

fltrd_pubRetStri_dipUG35_filter_fracData80.vcf (50212 kB)
MD5 = 504af06d90139dc6d2b270a91a65aadf

k8gprob_mngt.txt (9144 kB)
MD5 = b41ce24ca4f7f38d664688589607a7c3

Fastq_archive.zip (1918339 kB)
MD5 = 184e3524e24d1caf3eb67b1fd699075c

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