Description
The dataset contains five files of tabular data with an accompanying README file.
Supplementary file 1: Customized probe annotation file for the Nanostring nCounter Mouse PanCancer Immune Profiling Panel (catalog # 115000142). This file is provided as supporting material for a journal article.
Supplementary file 2: Microsoft Excel document with output from nSolver for differential expression analyses for pairwise comparisons noted by each named sheet. This data set is supporting material for a journal article.
Supplementary file 3: Microsoft Excel document with output from nSolver for global and directed significance scores for immune pathways. This data set is supporting material for a journal article.
Supplementary file 4: Microsoft Excel document with output from nSolver for immune pathway Z scores for pairwise comparisons noted by each named sheet. This data set is supporting material for a journal article.
Supplementary file 5: Microsoft Excel document with protein networks obtained from STRING database and clusters predicted by the MCL algorithm. This data set is supporting material for a journal article.
Author ORCID Identifier
Abby D. Benninghoff https://orcid.org/ 0000-0002-7993-0117
OCLC
1114687490
Document Type
Dataset
DCMI Type
Dataset
File Format
.csv, .xlsx, .txt
Publication Date
7-17-2019
Funder
NIH
Publisher
Utah State University
Award Number
NIH R01ES027353
Award Title
Dietary Lipids and Silica-Triggered Autoimmunity
Methodology
see corresponding journal publication for information and complete explanation of data.
Referenced by
Benninghoff, A. D., Bates, M. A., Chauhan, P. S., Wierenga, K. A., Gilley, K. N., Holian, A., Harkema, J. R., & Pestka, J. J. (2019). Docosahexaenoic Acid Consumption Impedes Early Interferon- and Chemokine-Related Gene Expression While Suppressing Silica-Triggered Flaring of Murine Lupus. Frontiers in Immunology, 10. https://doi.org/10.3389/fimmu.2019.02851
Language
eng
Code Lists
see individual README files. Full explanation of data is available in the corresponding journal article.
Disciplines
Medical Toxicology
License
This work is licensed under a Creative Commons Attribution 4.0 License.
Identifier
https://doi.org/10.26078/4697-1p77
Recommended Citation
Benninghoff, A. D., & Pestka, J. (2019). Data from: Docosahexaenoic Acid Consumption Impedes Early Interferon- and Chemokine-related Gene Expression While Suppressing Silica-Triggered Flaring of Murine Lupus. Utah State University. https://doi.org/10.26078/4697-1P77
Checksum
b585c8e4f7df4da7513dadb880af06b0
Additional Files
README_supplementary_file_1.txt (1 kB)MD5: E65BED2BDBB2BE7BDAE4D0F52C14DDD0
Supplementary_File_1_Probe_annotations.csv (126 kB)
MD5: C098AE9872347B862DE1E550A31C7D18
README_supplementary_file_2.txt (2 kB)
MD5: 2976AEACE25C74A4854CB0F4C74346EF
Supplementary_File_2_nSolver_differential_expression_analysis_results.xlsx (836 kB)
MD5: EBB61C0C0A2E2DCE33CD666A7CFC07B9
README_supplementary_file_3.txt (1 kB)
MD5: F4C722B169B2B71F089E6616AAD87692
Supplementary_File_3_nSolver_significance_scores.xlsx (21 kB)
MD5: DC86EA93D688DFA27FECBD640C9D6AB2
README_supplementary_file_4.txt (1 kB)
MD5: D4C7AEEC634211F5E3301A7A7A56ACD3
Supplementary_File_4_nSolver_pathway_Z_scores.xlsx (118 kB)
MD5: 64DE55B75183C637852E5368B1761188
README_supplementary_file_5.txt (2 kB)
MD5: 27C61E8C93FBD2E93532D4C23C9D0722
Supplementary_File_5_STRING-db_networks_and_predicted_clusters.xlsx (175 kB)
MD5: 92548FB249084FC67A14867E2DCC3B95
Comments
supplementary files for journal article