IBIOSIM 3: A Tool for Model-Based Genetic Circuit Design

Authors

Leandro Watanabe, University of Utah
Tramy Nguyen, University of Utah
Michael Zhang, University of Utah
Zach Zundel, University of UtahFollow
Zhen Zhang, Utah State UniversityFollow
Curtis Madsen, Boston University
Nicholas Roehner, BBN Technologies
Chris Myers, University of Utah

Document Type

Article

Journal/Book Title/Conference

ACS Synthetic Biology

Volume

8

Issue

7

Publisher

American Chemical Society

Publication Date

6-26-2018

Funder

NSF

First Page

1560

Last Page

1563

Abstract

The iBioSim tool has been developed to facilitate the design of genetic circuits via a model-based design strategy. This paper illustrates the new features incorporated into the tool for DNA circuit design, design analysis, and design synthesis, all of which can be used in a workflow for the systematic construction of new genetic circuits.

Recommended Citation

Leandro Watanabe, Tramy Nguyen, Michael Zhang, Zach Zundel, Zhen Zhang, Curtis Madsen, Nicholas Roehner, and Chris Myers ACS Synthetic Biology 2019 8 (7), 1560-1563 DOI: 10.1021/acssynbio.8b00078