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2012

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Automatic geomorphic feature extraction from lidar in flat and engineered landscapes, Paola Passalacqua, Patrick Belmont, and Efi Foufoula-Georgiou; Water Resources Research

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Unintended Consequences of Restoration: Loss of Riffle Habitats and Gravel Substrates Following Weir Installation, N. L. Salant, John C. Schmidt, P. E. budy, and Peter Wilcock; J. Env. Mgt.

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Accounting for Uncertainty in Cumulative Sediment Transport Using a Bayesian Approach, M. L. Schmelter, S. O. Erwin, and Peter Wilcock; Geomorphology

Final Report: Big River Protocol Development – A Prototype Warranty Project, Michael L. Scott, D. L. Perkins, and Joseph Michael Wheaton; U.S. Geological Survey

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Coupled Dynamics of the Co-Evolution of Bed Topography, Flow Turbulence and Sediment Transport in an Experimental Flume, A. Singh, E. Foufoula-Georiou, F. Foute-Agel, and Peter Wilcock; J. Geophysical Research - Earth Surface

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Interactive GIS Tool for Transforming Assumed Total Station Surveys to Real World Coordinates ‐ The CHaMP Transformation Tool, Joseph Michael Wheaton, C. Garrard, C. Volk, and K. Whitehead; Computers&Geosciences

Near Cencus Assessment of Fluvial Form, Process, Change and Associated Ecosystem Services., Joseph Michael Wheaton and G. B. Pasternack; US. Bureau of Reclamation, Sedimentation & River Hydraulics Group 2012 Annual Lecture Series

Size Matters. History Too., Peter Wilcock; American Geophysical Union, San Fransisco

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Stream Restoration in Gravel-Bed Rivers, Peter Wilcock; Gravel Bed Rivers: Processes, Tools, Environments

A Paleolimnological History of Metals Contamination and Eutrophication in the Great Salt Lake, Wayne A. Wurtsbaugh; Spring Runoff Conference

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The Great Salt Lake’s Deep Brine Layer and Its Importance for Mercury Bioaccumulation in Brine Shrimp (Artemia franciscana), Wayne A. Wurtsbaugh and Erin F. Jones; Final Report to the Utah Division of Forestry Fire and State Lands

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Eutrophication and Metal Concentrations in Three Bays of the Great Salt Lake (USA), Wayne A. Wurtsbaugh, Amy M. Marcarelli, and Greg L. Boyer; 2009 Final Report to the Utah Division of Water Quality, Salt Lake City, Utah

2011

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Evaluating the Reintroduction Potential of Lahontan Cutthroat Trout in Fallen Leaf Lake, California, Robert Al-Chokhachy, Mary Peacock, Lisa G. Heki, and Gary P. Thiede; North American Journal of Fisheries Management

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Biogeochemical Response of Alpine Lakes to a Recent Increase in Dust Deposition in the Southwestern, US, Ashley P. Ballantyne, Janice Brahney, C. L. Lawrence, J. Saros, and Jason C. Neff; Biogeosciences

A Methodological Intercomparison of Topographic and Aerial Photographic Habitat Survey Techniques, S. G. Bangen, Joseph Michael Wheaton, and Nicolaas Bouwes; AGU Fall Meeting 2011

A Methodological Intercomparison of Topographic and Aerial Photographic Habitat Survey Techniques, S. G. Bangen, Joseph Michael Wheaton, and Nicolaas Bouwes; American Fisheries Society 141st Annual Meeting

MethodologicalIntercomparisonofTopographic&AerialPhotographicHabitatSurveyTechniques, S. Bangen, Joseph Michael Wheaton, and K. D. DeMeurichy; PreparedforEcoLogicalResearchandNOAA

An Integrated Sediment Budget for the Le Seuer River Watershed, Patrick Belmont; An Integrated Sediment Budget for the Le Seuer River Watershed

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Floodplain Width Adjustments in Response to Rapid Base Level Fall and Knickpoint Migration, Patrick Belmont; Geomorphology

New Insights on Erosion and Transportation of Fine Sediment at the Watershed Scale, Patrick Belmont; New Insights on Erosion and Transportation of Fine Sediment at the Watershed Scale

New Tools for Nonpoint Sediment Pollution Research, Patrick Belmont; New Tools for Nonpoint Sediment Pollution Research

New Tools for Tracking Mud in Rivers, Patrick Belmont; New Tools for Tracking Mud in Rivers

Water and Sediment Dynamics in Agricultural Landscapes: Towards Prediction of Watershed Sediment Yield, Patrick Belmont; Water and Sediment Dynamics in Agricultural Landscapes: Towards Prediction of Watershed Sediment Yield

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Large Shift in Source of Fine Sediment in the Upper Mississippi River, Patrick Belmont, Karen B. Gran, Shawn P. Schottler, Peter Wilcock, Stephanie S. Day, Carrie Jennings, J. Wesley Lauer, Enrica Viparelli, Jane K. Willenbring, Daniel R. Engstrom, and Gary Parker; Environmental Science & Technology

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Large Shift in Sediment Source Challenges Upper Mississippi River Cleanup, Patrick Belmont, K. B. Gran, S. P. Schottler, Peter Wilcock, S. S. Day, C. jennings., J. W. Lauer, E. Viparelli, J. K. Willenbring, D. R. Engstrom, and G. Parker; Environ. Sci. Technol.

Kirk Bryan Field Trip: Holocene Landscape Evolution and Erosional Processes in the Le Sueur River, Central Minnesota, Patrick Belmont, K. Gran, C. E. Jennings, C. Wittkop, and S. S. Day; Guide Book for 2011 GSA National Meeting Kirk Bryan Field Trip, Minneapolis, MN

Measuring Event- and Century-Scale Changes in Sediment Sources to the Upper Mississippi River, Patrick Belmont, J. Willenbring, and J. Marquard; Measuring Event- and Century-Scale Changes in Sediment Sources to the Upper Mississippi River

How Do Habitat Connectivity and Dispersal Rates Affect Population Dynamics of an Imperiled Freshwater Fish?, T. Bowerman and Phaedra E. Budy; How Do Habitat Connectivity and Dispersal Rates Affect Population Dynamics of an Imperiled Freshwater Fish?

Effects of Substrate Size, Hyporheic Flow, and Spawning Site Selection on Bull Trout Egg and Alevin Survival, T. Bowerman, Phaedra E. Budy, and B. T. Neilson; Effects of Substrate Size, Hyporheic Flow, and Spawning Site Selection on Bull Trout Egg and Alevin Survival

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Changes to the Productivity and Trophic Structure of a Sockeye Salmon Rearing Lake in British Columbia, Janice Brahney, Richard Routedge, Darren G. Bos, and Marlow G. Pellatt; North American Journal of Fisheries Management

Evidence Linking Delayed Mortality of Snake River Salmon to Their Earlier Hydrosystem Experience, Phaedra E. Budy; Evidence Linking Delayed Mortality of Snake River Salmon to Their Earlier Hydrosystem Experience

Towards a Better Understanding of the Factors that Limit and Facilitate One of the World's Most Invasive Fishes: What Can We Learn From an Intercontinental Comparison?, Phaedra E. Budy; Towards a Better Understanding of the Factors that Limit and Facilitate One of the World's Most Invasive Fishes: What Can We Learn From an Intercontinental Comparison?

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Predicting Fish Growth Potential and Identifying Potential Water Quality Issues: A Apatially Explicit Bioenergetics Approach, Phaedra E. Budy, M. E. Baker, and S. K. Dahle; Environmental Management

Native Fish Population Status and Trends and Opportinities for Improvement on the Lower Dolores River: Phase I., Phaedra E. Budy and N. Salant; Native Fish Population Status and Trends and Opportunities for Improvement on the Lower Dolores River: Phase I

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The comparability of bioassessments: A review of conceptual and methodological issues, Y. Cao and Charles P. Hawkins; Journal of the North American Benthological Society

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Natural Flow Regime, Temperature and the Composition and Richness of Invertebrate Assemblages in Streams of the Western United States, Kiran J. Chinnayakanahalli, Charles P. Hawkins, David G. Tarboton, and Ryan A. Hill; Freshwater Biology

Untangling Geomorphic Processes in the Grand Canyon with Topographic Time Series from Hybrid Surveys, N. Czarnomski, Joseph Michael Wheaton, P. E. Grams, J. E. Hazel, M. Kaplinski, and J. Schmidt; AGU Fall Meeting 2011

Bridge Creek IMW Topographic and Aerial Photography Surveys: 2010-­‐2011 Deliverables, K. DeMeurichy, Joseph Michael Wheaton, S. Welsh, and F. Consolati; Report for Eco Logical Research and NOAA

Nutrient Transport Through Lakes in a Sub-Alpine Watershed in the Sawtooth Mountains of Idaho, Dave M. Epstein; UC Davis Limnology Lecture

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Transcriptomics of Environmental Acclimation and Survival in Pacific Sockeye Salmon (Oncorhynchus nerka) During Spawning Migration, Tyler G. Evans, Edd Hammill, Karia H. Kaukinen, Angela D. Schulze, David A. Patterson, Karl K. English, Janelle M.R. Curtis, and Kristina M. Miller; Molecular Ecology

A CDI Collaboration: Geosciences and Engineering for Intelligent Digital Watersheds, E. Foufoula, J. Schnoor, Patrick Belmont, and P. Passalacqua; A CDI Collaboration: Geosciences and Engineering for Intelligent Digital Watersheds

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Revisiting Scaling Laws in River Basins: New Considerations Across Hillslope and Fluvial Regimes, C. Gangodagamage, Patrick Belmont, and E. Foufoula-Georgiou; Water Resources Research

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Revisiting scaling laws in river basins: New considerations across hillslope and fluvial regimes, Chandana Gangodagamage, Patrick Belmont, and Efi Foufoula-Georgiou; Water Resources Research

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Amoebae and Pathogenic Legionella pneumophila in Saline Environments, R. J. Gast, D. M. Moran, M. R. Dennett, Wayne A. Wurtsbaugh, and L. Amaral-Zettler; Journal of Water and Health

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Lakes as buffers of stream dissolved organic matter (DOM) variability: Temporal patterns of DOM characteristics in mountain stream-lake systems, K. J. Goodman, Michelle A. Baker, and Wayne A. Wurtsbaugh; Journal of Geophysical Research - Biogeosciences

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Landscape Evolution in South-Central Minnesota and the Role of Geomorphic History on Modern Erosional Processes, K. B. Gran, Patrick Belmont, S. S. Day, N. Finnegan, C. Jennings, J. W. Lauer, and Peter Wilcock; GSA Today

An Integrated Sediment Budget for the Le Sueur River Basin, K. Gran, Patrick Belmont, S. Day, C. Jennings, J. W. Lauer, E. Viparelli, Peter Wilcock, and G. Parker

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The Potential of Passive Stream Restoration to Improve Ecosystem Health and Minimize the Impact of Fish Disease: A Short-Term Assessment, E. S. Hansen and Phaedra E. Budy; Journal of the North American Benthological Society

Morphodynamic Modeling of Gravel Bed Rivers: a Step-­‐Length Based Approach, Alan Kasprak and Joseph Michael Wheaton; AGU Fall Meeting 2011

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Lessons learned from invasive plant control experiments: a systematic review and meta-analysis, Karin M. Kettenring and Carrie R. Adams; Journal of Applied Ecology

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Carex Seedling Emergence in Restored and Natural Prairie Wetlands, Karin M. Kettenring and Susan M. Galatowitsch; 31

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Seed Rain of Restored and Natural Prairie Wetlands, Karin M. Kettenring and Susan M. Galatowitsch; Wetlands

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Mechanisms of Phragmites australis invasion: feedbacks among genetic diversity, nutrients, and sexual reproduction, Karin M. Kettenring, Melissa K. McCormick, Heather M. Baron, and Dennis F. Whigham; Journal of Applied Ecology

Analysis of Historical Longitudinal Profiles of the Colorado River Downstream From Glen Canyon Dam, 1965-­‐2009, N. Kilham, John C. Schmidt, and Joseph Michael Wheaton; Final Report for the Intermountain Center for River Restoration and Rehabilitation

Out of Place Predators: Using Bioenergetic Efficiency to Explain Predator Performance Across an Array of Small Impoundments in Northeast Utah, S. L. Klobucar, Phaedra E. Budy, and Gary P. Thiede; Out of Place Predators: Using Bioenergetic Efficiency to Explain Predator Performance Across an Array of SmallImpoundments in Northeast Utah

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Assessment and Evaluation of the Utah Master Naturalist Program: Implications for Targeting Audiences, Mark Larese-Casanova; Journal of Extension

A Numerical Model for Sediment Tracer Movement Through an Actively Evolving Floodplain, J. W. Lauer, E. Viparelli, Patrick Belmont, and G. Parker; A Numerical Model for Sediment Tracer Movement Through an Actively Evolving Floodplain

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Non-uniform changes to whitewater recreation in California’s Sierra Nevada from regional climate warming, S. T. Ligare, J. H. Viers, Sarah E. Null, D. Rheinheimer, and J. F. Mount; River Research and Applications

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Factors Driving Spatial and Temporal Variation in Production and Production/Biomass Ratio of Stream-Resident Brown Trout (Salmo trutta) in Cantabrian Streams, J. Lobón-­‐Cerviá, G. Gonzalez, and Phaedra E. Budy; Freshwater Biology

HighResolutionMappingofInstreamHabitat:PilotStudyusingGround-­‐basedLiDaRinLoganRiverWatershed, R. L. Lokteff, K. D. DeMeurichy, and Joseph Michael Wheaton; Report prepared for the US Forest Service

Ground Based Lidar and PIT Tags: Does High Resolution Data Improve Our Understanding of a Fish's Utilization of Habitat?, R. Lokteff, Brett B. Roper, and Joseph Michael Wheaton; American Fisheries Society 141st Annual Meeting

Spatial Distribution and Species Segregation of Bonneville Cutthroat Trout, Brown Trout, and Brook Trout, R. Lokteff, Joseph Michael Wheaton, and Brett B. Roper; American Fisheries Society 141st Annual Meeting

Hydraulic and Vegetative Models of Historic Environmental Conditions Isolate the Role of Riparian Vegetation in Inducing Channel Change, R. B. Manners, J. Schmidt, and Joseph Michael Wheaton; AGU Fall Meeting 2011

Investigating Sediment Source to Sing Processes in a Post-Orogenic Landscape, T. L. Marstellar, K. L. Frankel, Patrick Belmont, and K. W. Wegmann; Investigating Sediment Source to Sing Processes in a Post-Orogenic Landscape

Brown Trout, A. McIntosh, Peter McHugh, and Phaedra E. Budy; Handbook of Global Freshwater Invasive Species ( A Summary of the Current State of Knowledge of 30 of the Most Notable Global Invasive Freshwater Species)

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Genomic Signatures Predict Migration and Spawning Failure in Wild Salmon, Kristina M. Miller; Shaorong Li; Karoa H, Kaukinen; Norma Ginther; Edd Hammill; Janelle M. Curtis; David A. Patterson; Thomas Sierocinski; Louise Donnison; Paul Pavlidis; Scott G. Hinch; Kimberly A. Hruska; Steven J. Cooke; Karl K. English; and Anthony P. Ferrell; Science

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Managing California’s Water: Insights from Interviews with Water Policy Experts, Sarah E. Null, E. Bartolomeo, J. Lund, and E. Hanak; Online appendix to Managing California’s Water: From Conflict to Reconciliation. Prepared for the Public Policy Institute of California

Water Leaks… what water people say, Sarah E. Null, E. Bartolomeo, P. Zikalala, J. R. Lund, E. Hanak, and C. R. Buck; California Water and Environmental Modeling Forum. Asilomar, CA

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Fish habitat optimization to prioritize river restoration decisions, Sarah E. Null and J. R. Lund; River Research and Applications

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Zooplankton Community Structure in Arctic Ponds: Shifts Related to Pond Size, W. J. O'Brien and Chris Luecke; Arctic

WorkingwithBeavertoRestoreSalmonHabitatintheBridgeCreekIntensivelyMonitoredWatershed:DesignRationaleandHypotheses, M. Pollock, Joseph Michael Wheaton, Nicolaas Bouwes, and C. E. Jordan; InterimReport,NOAANorthwestFisheriesScienceCenter

The Relative Importance of Inserting TIN Topographic Breaklines in DEM Creation, E. Portugal, S. G. Bangen, and Joseph Michael Wheaton; AGU Fall Meeting 2011

Managing Stream Temperatures for Climate Warming Adaptation with Selective Withdrawal from Reservoirs, D. Rheinheimer, J. R. Lund, Sarah E. Null, and J. H. Viers; American Geophysical Union Fall Meeting

Can a University, the UDWR, the US Forest Service, and a Trout Unlimited Chapter Really Accomplish Anything?, W. Carl Saunders, Phaedra E. Budy, P. Burnett, and P. Holden; Can a University, the UDWR, the US Forest Service, and a Trout Unlimited Chapter Really Accomplish Anything?

Using Large-Scale Population Manipulation to Understand Source-Sink Dynamics of Invasive Brown Trout, W. Carl Saunders, Phaedra E. Budy, and Gary P. Thiede; Using Large-Scale Population Manipulation to Understand Source-Sink Dynamics of Invasive Brown Trout

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Multi-Scale Statistical Characterization of Migrating Dunes in Sand-Bed Rivers, A. Singh, S. Lanzoni, Peter Wilcock, and E. Foufoula-Georgiou; Water Res. Research

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Closing the Gap Between Watershed Modeling, Sediment Budgeting, and Stream Restoration, Sean M.C. Smith, Patrick Belmont, and Peter Wilcock; Geophysical Monograph Series

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Closing the Gap Between Watershed Modeling, Sediment Budgeting, and Stream Restoration, S. M. C. Smith, Patrick Belmont, and Peter Wilcock; Stream Restoration in Dynamic Systems: Scientific Approaches, Analyses, and Tools

Closing the Gap Between Watershed Modeling, Sediment Budgeting, and Stream Restoration, S. M.C. Smith, Patrick Belmont, and Peter Wilcock; Stream Restoration in Dynamic Fluvial Systems: Scientific Approaches, Analyses, and Tools

Sediment Sources and Transport Pathways in the Root River, J. Stout and Patrick Belmont; Sediment Sources and Transport Pathways in the Root River

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A Model to Predict the Evolution of a Gravel Bed River Under an Imposed Cyclic Hydrograph and its Application to the Trinity River, E. Viparelli, D. Gaeuman, Peter Wilcock, and G. Parker; Water Resources Research

Giving Fish More Energy without Giving Them More Food: Can Streambed Topography Influence a Fish's Net Rate of Energy Intake?, E. C. Wall, Nicolaas Bouwes, S. Bennett, Joseph Michael Wheaton, and R. Camp; American Fisheries Society 141st Annual Meeting

Crowded Niche Space: the Impact of Novel Competitors and Predators on the Growth Rates of Endemic Desert Fishes, T. Walsworth, Phaedra E. Budy, and Gary P. Thiede; Crowded Niche Space: the Impact of Novel Competitors and Predators on the Growth Rates of Endemic Desert Fishes

Degraded Habitat and Crowded Niche Space: Understanding Impacts of Habitat Loss and Non-Native Fishes on Endemic, Riverine Desert Fishes, T. Walsworth, Phaedra E. Budy, and Gary P. Thiede; Degraded Habitat and Crowded Niche Space: Understanding Impacts of Habitat Loss and Non-Native Fishes on Endemic, Riverine Desert Fishes

Crew Variability in Topographic Data, Joseph Michael Wheaton and S. G. Bangen; Crew Variability in Topographic Data

Topographic Survey Comparisons, Joseph Michael Wheaton, S. G. Bangen, and E. Portugal; Topographic Survey Comparisons

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Multiscale Feedbacks in Ecogeomorphology, Joseph Michael Wheaton, C. Gibbins, J. Wainwright, B. McElroy, and L. Larsen; Geomorphology

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Mercury and Selenium Bioaccumulation in the Stromatolite Community of the Great Salt Lake, Utah, USA, Wayne A. Wurtsbaugh; ISSLR 2011 - Mar Chiquita

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Relationships between eutrophication, cyanobacteria blooms and avian botulism mortalities in the Great Salt Lake, Wayne A. Wurtsbaugh; Utah Wetlands Foundation

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Mercury in the Pelagic and Benthic Food Webs of the Great Salt Lake, Wayne A. Wurtsbaugh, Erin Fleming, Caleb Izdepski, and Jodi Gardberg; Great Salt Lake Technical Team

Biostrome communities and mercury and selenium bioaccumulation in the Great Salt Lake (Utah, USA), Wayne A. Wurtsbaugh, J. Gardberg, and C. Izdepski; Science of the Total Environment

2010

Capture-Recapture Approaches in a Small Streams: Advances In Our Understanding of Fish Ecology, R. Al-Chokhachy and Phaedra E. Budy; Capture-Recapture Approaches in a Small Streams: Advances In Our Understanding of Fish Ecology

Evaluating Bull Trout Population Trends and Corresponding Changes in Population Structure: Implications for Recovery, R. Al-Chokhachy, Phaedra E. Budy, and T. Bowerman; Evaluating Bull Trout Population Trends and Corresponding Changes in Population Structure: Implications for Recovery

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A Review of Bull Trout Habitat Associations and Exploratory Analyses of Patterns Across the Interior Columbia River Basin, R. Al-Chokhachy, Brett B. Roper, T. Bowerman, and Phaedra E. Budy; North American Journal of Fisheries Management

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Seed Banks of Phragmites australis-Dominated Brackish Wetlands: Relationships to Seed Viability, Inundation, and Land Cover, Andrew H. Baldwin, Karin M. Kettenring, and Dennis F. Whigham; Aquatic Botany

Geochemically-Assisted Sediment Budgets: New Opportunities and Challenges, Patrick Belmont; Geochemically-Assisted Sediment Budgets: New Opportunities and Challenges

Tracking Mud in Southern Minnesota Rivers, Patrick Belmont; Tracking Mud in Southern Minnesota Rivers

Sediment Budget for Source Analysis, Patrick Belmont, E. Viparelli, and P. Wilcock; Sediment Budget for Source Analysis

Sediment Budget for Source Analysis: Le Sueur River, Minnesota, Patrick Belmont, Peter Wilcock, and E. Viparelli; Federal Interagency Sedimentation Conference

Quantifying Sediment Dynamics Over Century and Event Timescales with Beryllium-10 and Lead-210, Patrick Belmont, J. Willenbring, and S. Schottler; Quantifying Sediment Dynamics Over Century and Event Timescales with Beryllium-10 and Lead-210